PDBe MCP Servers integrate Protein Data Bank Europe resources with LLMs via Model Context Protocol. Provides seamless access to protein structure data through API tools and graph database schema assistance for intelligent Cypher query generation, bridging structural biology and AI research.
Last commit October 19, 2026, 24 days ago.
42 GitHub stars and 0 Honeystax upvotes. Copy the install, test the workflow, then decide if it earns a permanent slot.
You can test this quickly and remove it cleanly if it misses.
Starts at 6. Added: GitHub health 62/100 +8, no security policy +8, no code of conduct +3.
AI Agent
Universal
Model
Multiple
Fastest way to find out if PDBe-MCP-Servers belongs in your setup.
Copy the install command, run a real test, and back it out cleanly if it slows you down.
claude mcp add pdbe-mcp-servers -- npx pdbe-mcp-serversRun this first. You will know quickly if the workflow earns a permanent slot.
claude mcp remove pdbe-mcp-serversNo messy cleanup loop. If it misses, remove it and keep moving.
Install Location
~/ └─ .claude.json └─ mcp_servers/ └─ pdbe-mcp-servers ← registers here
PDBe-MCP-Servers is listed on Honeystax as a MCP Server for Universal, since June 25, 2026. Its code is at github.com/PDBeurope/PDBe-MCP-Servers, with 42 GitHub stars and 2 open issues. Last commit October 19, 2026, 24 days ago. GitHub's community health check gives it 62 out of 100.
Source: GitHub repository
Source check: October 19, 2026
Upstream commit: October 19, 2026
Repository state: Not marked archived
Honeystax upvotes are community interest signals, not star ratings. GitHub stars and repository health are source measurements; editorial risk and trial-cost notes are Honeystax analysis.