A Model Context Protocol (MCP) server that exposes PyMOL as a typed tool surface to your agent (Claude Code/Desktop, Codex, or any MCP-compatible client)
Last commit October 5, 2026, 36 days ago.
104 GitHub stars and 0 Honeystax upvotes. Copy the install, test the workflow, then decide if it earns a permanent slot.
You can test this quickly and remove it cleanly if it misses.
Starts at 6. Added: last commit 36 days ago +7, GitHub health not measured +10, no security policy +8, no contributing guide +4, no code of conduct +3.
AI Agent
Multiple
Model
Multiple
Fastest way to find out if agentic-pymol belongs in your setup.
Copy the install command, run a real test, and back it out cleanly if it slows you down.
claude mcp add agentic-pymol -- npx agentic-pymolRun this first. You will know quickly if the workflow earns a permanent slot.
claude mcp remove agentic-pymolNo messy cleanup loop. If it misses, remove it and keep moving.
Install Location
~/ └─ .claude.json └─ mcp_servers/ └─ agentic-pymol ← registers here
agentic-pymol is listed on Honeystax as a MCP Server for Multiple, since October 5, 2026. Its code is at github.com/Arcadia-Science/agentic-pymol, with 104 GitHub stars. Last commit October 5, 2026, 36 days ago.
Source: GitHub repository
Source check: October 5, 2026
Upstream commit: October 5, 2026
Repository state: Not marked archived
Honeystax upvotes are community interest signals, not star ratings. GitHub stars and repository health are source measurements; editorial risk and trial-cost notes are Honeystax analysis.